django_to_galaxy.models.Workflow
- class django_to_galaxy.models.Workflow(*args, **kwargs)
Table for Galaxy workflows.
- __init__(*args, **kwargs)
Methods
__init__
(*args, **kwargs)check
(**kwargs)clean
()Hook for doing any extra model-wide validation after clean() has been called on every field by self.clean_fields.
clean_fields
([exclude])Clean all fields and raise a ValidationError containing a dict of all validation errors if any occur.
date_error_message
(lookup_type, field_name, ...)delete
([using, keep_parents])from_db
(db, field_names, values)full_clean
([exclude, validate_unique, ...])Call clean_fields(), clean(), validate_unique(), and validate_constraints() on the model.
get_constraints
()get_deferred_fields
()Return a set containing names of deferred fields for this instance.
invoke
(datamap, history)Invoke workflow using bioblend.
is_valid
()@TODO method to check if galaxy_id is still pointing to a valid element.
prepare_database_save
(field)refresh_from_db
([using, fields])Reload field values from the database.
save
([force_insert, force_update, using, ...])Save the current instance.
save_base
([raw, force_insert, force_update, ...])Handle the parts of saving which should be done only once per save, yet need to be done in raw saves, too.
serializable_value
(field_name)Return the value of the field name for this instance.
synchronize
()@TODO method to synchronize entry in django from galaxy based on galaxy_id.
unique_error_message
(model_class, unique_check)validate_constraints
([exclude])validate_unique
([exclude])Check unique constraints on the model and raise ValidationError if any failed.
Attributes
annotation
Annotation on the galaxy side.
galaxy_id
Invocation id used on the galaxy side.
galaxy_owner
Galaxy user that owns the workflow.
galaxy_owner_id
galaxy_workflow
Galaxy object using bioblend.
id
A wrapper for a deferred-loading field.
name
Name used on the galaxy side.
objects
pk
published
Whether it is published or not on the galaxy side.
workflows
Accessor to the related objects manager on the reverse side of a many-to-one relation.